The q2-ena-uploader is a QIIME 2 plugin designed for the programmatic submission of metadata and raw sequence reads to the European Nucleotide Archive (ENA).

To develop this plugin, we followed the ENA documentation. The submission process is depicted in the image above (courtesy of the ENA).
Before you proceed with the submission, you should follow the installation instructions.
If you already have a working installation of q2-ena-uploader, you can jump straight to the submission tutorial.